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Oxford researchers working with GPUs

Within the university we now have many groups using NVIDIA GPUs:
  • Biochemistry:

    Mark Sansom, Phil Biggin: NAMD and Gromacs molecular dynamics simulations

  • Chemistry:

    Peter Hore, Jason Lau: magnetic field effects

    Rob Paton: organic chemistry

  • Computer Science:

    Luke Cartey, Oege de Moor: high-level domain-specific language design for bioinformatics

  • Engineering:

    Ian Reid, Carl Ren: computer vision

    Stephen Roberts: scalable Bayesian inference, large network analysis, multi-agent systems, distributed control, human-agent collectives, astrostatistics

    Stefano Utili: soil mechanics using discrete element methods

  • Maths:

    Guido Klingbeil: biological stochastic simulation

  • OeRC:

    Mike Giles, Gihan Mudalige: OP2 library development for unstructured grid PDE methods

    Wes Armour, Fred Dulwich, Ben Mort, Chris Williams: astrophysics

    Jeyan Thiyagalingam, Anne Trefethen: energy efficient algorithms and high-level programming abstractions for GPUs

  • Oxford-Man Institute of Quantitative Finance:

    Terry Lyons: "rough paths" simulations

    Mike Giles: Monte Carlo and finite difference methods

  • Physics:

    Aris Karastergiou: astrophysics

    Jon Doye, Flavio Romano, Petr Sulc: DNA self-assembly and simulation of DNA strand interactions

    Irwin Zaid: analysis of bacteria

  • Statistics:

    Charlotte Deane: knowledge extraction from compound libraries

    Chris Holmes, Anthony Lee, Chris Yau: sequential Monte Carlo / particle filters

    Arnaud Doucet, Chris Holmes, Anthony Lee: genetic association studies

  • Wellcome Trust Centre for Human Genetics:

    Gerton Lunter: human genome sequencing

 


 

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